Jul 07, 2008 optimal selection of reduced rank estimators of highdimensional matrices bunea, florentina, she, yiyuan, and wegkamp, marten h. Pdf multivariate reduced rank regression, theory and. Regression, classification, and manifold learning springer texts in statistics series by alan j. Reduced rank regression for the multivariate linear model, its relationship to certain classical multivariate techniques, and its application to the analysis of multivariate data. When the dimensions p and q are large relative to the sample size n, the coef. Jin department of biostatistics, columbia university d. We propose an approach to multivariate nonparametric regression that generalizes reduced rank regression for linear models. Reducedrank regression is a method with great potential for dimension reduction but has found few applications in applied statistics. Keywords reduced rank, multivariate regression, partial least squares.
The goal is to present the current state of the art in multivariate analysis methods while attempting to place them on a firm statistical basis. Residual analysis for reducedrank regression and canonical variates. Reducedrank vector generalized linear models thomas w yee. I suggest a new method with soft shrinkage of the terms in the decomposition. Residual analysis for reduced rank regression and canonical variates. Model free multivariate reduced rank regression with categorical predictors claude messan setodji and lexin li rand corporation and north carolina state university abstract. A new procedure is proposed that performs reduced rank regression rrr in nongaussian contexts based on multivariate dispersion models. Apr 14, 2020 using several publicly available patchseq data sets, we show that sparse reduced rank regression outperforms both sparse full rank regression and nonsparse reduced rank regression in terms of predictive performance, and can outperform existing methods for sparse partial least squares and sparse canonical correlation analysis in terms of out.
Reduced rank regression is a model where there is not a single y outcome, but multiple y outcomes. The author offers a balance between foundations and methodology by. This method starts with the classical multivariate regression model framework but recognizes the possibility for the reduction in the number of parameters through a restrietion on the rank of the regression coefficient matrix. C,so that the rows or columns of b lie in an rdimensional subspace of rq or. Cook and setodji 2003 introduced the notion of modelfree reducedrank in multivariate regression. The dimension reduction aspect of multivariate regression is taken care of by the socalled reducedrank regression rrr izenman 1975. Multivariate failure time data arises when each study subject can. For improving predictive accuracy and facilitating interpretation, it is often desirable that.
Multiple linear regression model design matrix fitting the model. Abtsracta reducedrank regression with sparse singular value decomposition rssvd approach was proposed by chen et al. In general, to use the bayesian reduced rank regression model, the rank of the model, k 1, and the rank of the low rank approximation for the covariance matrix, k 2, must be. Optimal tests for reduced rank time variation in regression coefficients and level variation in the multivariate local level model. Multivariate reduced rank regression, theory and applications by gregory c. Sparse reducedrank regression for exploratory visualization. We find that using shrinkage and rank reduction in combination rather than separately improves substantially the accuracy of forecasts, both when the. Reducedrank regression rrr is an important tool in multivariate statistical analysis. Professor ji zhu and professor naisyin wang multivariate regression problems are a simple generalization of the univariate regression problem to the situation where we want to predict q1 responses that depend on the same set of features or predictors. In particular, we propose three alternative reduced rank forecasting models and compare their predictive performance for us time series with the most promising existing alternatives, namely, factor models, large scale bayesian vars, and multivariate boosting. A typical genomewide association study searches for associations between single nucleotide. Simple tests for reduced rank in multivariate regression. As such, latent features are extracted from each view in a supervised fashion. However, they only focused on continuous predictors.
Forecasting large datasets with reduced rank multivariate models. Cook and setodji 2003 introduced the notion of modelfree reduced rank in multivariate regression. A reduced rank regression with sparse singular value decomposition rssvd approach was proposed by chen et al. Although reduced rank regression can substantially reduce the number of free parameters in multivariate problems, it is extremely sensitive to outliers, which are bound to occur. A note on rank reduction in sparse multivariate regression. Reduced rank stochastic regression with a sparse singular. Multivariate regression with reduced rank rrr, a special case of the classic multi variate regression model derived from the works of anderson 4, izenman 12 and davies and tso 5, is. We study the effective degrees of freedom of a general class of reduced rank estimators for multivariate regression in the framework of steins unbiased risk estimation. Pdf on jan 1, 2000, paolo paruolo and others published multivariate reduced rank regression, theory and applications by gregory c.
The paper addresses the issue of forecasting a large set of variables using multivariate models. There has recently been renewed research interest in the development of tests of the rank of a matrix. In addition to reducing the number of parameters to be estimated, the reducedrank formulation is described as. Nonparametric reduced rank regression internet archive. On the degrees of freedom of reducedrank estimators in. Department of statistics stanford university university of chicago university of washington abstract we propose an approach to multivariate nonparametric regression that generalizes. Scand j statist 33 multivariate rank regression 3 and sr k. Jul 15, 2014 however, here we present a general infinitedimensional framework available in our implementation, which does not necessitate the selection of a fixed rank. The problem of estimating the regression coefficient matrix having known reduced rank for the multivariate linear model when both sets of variates are jointly stochastic is discussed. The reduced rank regression model is a multivariate regression model. Reduced rank multivariate dispersion models rrmdm generalise rrr to a very large class of distributions, which include continuous distributions like the normal, gamma, inverse gaussian, and discrete. This is even more serious in highdimensional or bigdata applications.
In highdimensional multivariate regression problems, enforcing low. In this article, we propose an extension of modelfree multivariate reduced rank regression to incorporate a mixture of continuous and categorical predictors. Multivariate regression with reduced rank rrr, a special case of the classic multivariate regression model. Forecasting large datasets with reduced rank multivariate. Of course, you can just fit a separate multivariate linear regression for each response, but this seems inefficient when the functional relationship between the predictors and each response is clearly similar.
The reduced rank regression formulation immediately implies some structural assumptions deemed sensible in the current setting. Reducedrank regression for the multivariate linear model core. Reducedrank vector generalized linear models thomas w. Rank regression analysis of multivariate failure time data. Optimal selection of reduced rank estimators of highdimensional matrices bunea, florentina, she, yiyuan, and wegkamp, marten h. For full access to this pdf, sign in to an existing account, or purchase an annual subscription. Using the url or doi link below will ensure access to this page indefinitely.
Journalofmultivariateanalysis15720171428 formulation,theoptimalonesareselectedtoachievethehighestposteriorprobabilitygiventhedata. Regression, classification, and manifold learning by alan j. We develop a sparse reduced rank regression srrr method for multivariate regression by addressing the two aspects of the question. Calibrated multivariate regression with application to. Mar 31, 2007 we propose a new procedure to perform reduced rank regression rrr in nongaussian contexts, based on multivariate dispersion models. We cast this new problem under the familiar multivariate regression framework and propose an integrative reducedrank regression irrr, where each view has its own lowrank coefficient matrix.
A modelfree test for reduced rank in multivariate regression. A multivariate subset or partially reducedrank regression model is considered as an extension of the usual multivariate reducedrank model. In addition to reducing the number of parameters to be estimated, the reduced rank formulation is described as. Multivariate reduced rank regression in nongaussian. Reducedrank regression for the multivariate linear model. Pdf this paper presents a procedure for coefficient estimation in a multivariate regression model of.
Performanceoriented statistical parameter reduction of. A technique that combines the two broad themes in a natural fashion is the method of reducedrank regres sion. Pdf model free multivariate reducedrank regression with. To address this, reduced rank regression is proposed for the class of vector generalized linear models vglms, which is very large. Pdf estimation procedure for reduced rank regression, plssvd. We propose a calibrated multivariate regression method named cmr for fitting high dimensional multivariate regression models. We believe that sparse reducedrank regression can provide a valuable tool for the exploration and visualization of paired multivariate datasets, including patchseq. Reduced rank regression is a method with great potential for dimension reduction but has found few applications in applied statistics. The dimension reduction aspect of multivariate regression is taken care of by the socalled reduced rank regression rrr izenman 1975. Specifically, we focus on classical reduced rank regression, a two.
We propose an extension of modelfree multivariate reducedrank regression to incorporate a. In reduced rank regression the matrix b is estimated under a rank constraint r rankb. Performanceoriented statistical parameter reduction of parameterized systems via reduced rank regression. Multivariate reducedrank regression, theory and applications. Estimation procedure for reduced rank regression, plssvd. Assessing multivariate genemetabolome associations with rare variants using bayesian reduced rank regression. Adaptive estimation of the rank of the coefficient matrix in highdimensional multivariate response regression models bing, xin and wegkamp, marten h. This book should appeal to both practitioners and researchers, who may deal with moderate and highdimensional multivariate data. Introduction to multivariate statistical analysis, wiley, new york 1958. The method of reducedrank regression uses a certain decomposition of the ordinary least squares estimate of the matrix of regression coefficients, and shrinks the last terms of this decomposition exactly to 0. There exist essentially two different methods of estimation.
It provides interpretable results based on a low dimensional view of the. Forecasting large datasets with bayesian reduced rank. Furthermore, the reducedrank regression, as well as the. Partially reducedrank multivariate regression models 903 of the corresponding estimate e 1ty cxe y cxe 0. Forecasting large datasets with bayesian reduced rank multivariate models. Residual analysis for reducedrank regression and canonical variates, dept.
To address this, reducedrank regression is proposed for the class of vector generalized linear models vglms, which is very large. In particular, we propose three alternative reduced rank forecasting models and compare their predictive performance with the most promising existing alternatives, namely, factor models, large scale bayesian vars, and multivariate boosting. To jointly model the multivariate response, the method efficiently constructs a prespecified number of latent variables as some sparse linear combinations of the predictors. In modern multivariate statistical techniques, alan izenman attempts to synthesize multivariate methods developed across the various literatures into a comprehensive framework. Multivariate prediction using softly shrunk reducedrank. This book attempts to bring together, for the first time, the scope and range of the tool of multivariate reduced rank regression, which has been in existence in varied forms for nearly fifty years. Ying department of statistics, columbia university abstract. Topics on reduced rank methods for multivariate regression. Xiaokang liu, shujie ma, kun chen submitted on 10 mar 2020 abstract.
This includes details on maximum likelihood estimation of parameters in the reduced. When several response variables are studied simultaneously, we are in the sphere of multivariate regression. For a reduced rank multivariate stochastic regression model of rank r, the regression coefficient matrix can be expressed as a sum of r unit rank matrices each of which is proportional to the outer product of the left and right singular vectors. We propose a nested reducedrank regression nrrr approach in fitting regression model with multivariate functional responses and predictors. A technique that combines the two broad themes in a natural fashion is the method of reduced rank regres sion. Robust reducedrank regression biometrika oxford academic. Jul 26, 2018 we cast this new problem under the familiar multivariate regression framework and propose an integrative reduced rank regression irrr, where each view has its own low rank coefficient matrix. We develop a sparse reducedrank regression srrr method for multivariate regression by addressing the two aspects of the question.
Modern multivariate statistical techniques regression. Optimal tests for reduced rank time variation in regression. Sparse reducedrank regression for simultaneous dimension. Partially reduced rank multivariate regression models 903 of the corresponding estimate e 1ty cxe y cxe 0. Reduced rank multivariate dispersion models rrmdm generalize rrr to a very large class of distributions, which include continuous distributions like the normal, gamma, inverse gaussian, and discrete distributions like the poisson, the binomial and the. We study the effective degrees of freedom of a general class of reducedrank estimators for multivariate regression in the framework of steins unbia. Compared with existing methods, cmr calibrates regularization for each regression task with respect to its noise level so that it simultaneously attains improved finitesample performance and tuning insensitiveness. Regression, classification, and manifold learning springer texts in.
Furthermore, the reduced rank regression, as well as the. Multivariate functional regression via nested reducedrank. Bayesian sparse reduced rank multivariate regression. Reducedrank multivariate dispersion models rrmdm generalize rrr to a very large class of distributions, which include continuous distributions like the normal, gamma, inverse gaussian, and discrete distributions like the poisson, the binomial and the. Simple tests for reduced rank in multivariate regression scott gilbert. This article evaluates the performance of some asymptotic tests of rank determination in reduced rank regression models together with bootstrapped versions through simulation experiments. Reducedrank regression for the multivariate linear model, its relationship to certain classical multivariate techniques, and its application to the analysis of multivariate data. We propose a nested reducedrank regression nrrr approach in fitting regression model with multivariate functional. Assessing multivariate genemetabolome associations with. Lin department of biostatistics, university of north carolina z. One possible explanation of this statement is as follows sas, 2016.
Feb 17, 2012 the method of reduced rank regression uses a certain decomposition of the ordinary least squares estimate of the matrix of regression coefficients, and shrinks the last terms of this decomposition exactly to 0. Multivariate reduced rank regression in nongaussian contexts. In the area of multivariate analysis, there are two broad themes that have emerged over time. Topics in reduced rank methods for multivariate regression by ashin mukherjee advisors. Assessing multivariate genemetabolome associations with rare. Sparse multivariate reducedrank regression with covariance. Model free multivariate reducedrank regression with categorical predictors claude messan setodji and lexin li rand corporation and north carolina state university abstract. Multivariate functional regression via nested reducedrank regularization. Pdf reducedrank regression models with two sets of regressors. Rank regression analysis of multivariate failure time data based on marginal linear models z.
Reducedrank regression can be carried out by standard computer pro grammes for multivariate analysis. Multivariate reduced rank regression in nongaussian contexts, using copulas. In this article, certain results for the basic reduced. Regression, classification, and manifold learning springer texts in statistics izenman, alan j. In highdimensional multivariate regression problems, enforcing. The rank estimators are derived from a class of weighted logrank statistics. Model free multivariate reducedrank regression with categorical predictors.